cancer_type SNP_id log_rank_pvalue sample_size Median_survival_time_AA Median_survival_time_Aa Median_survival_time_aa FDR SNP_position Alleles LIHC rs12413411 4.7e-05 367 19.58 21.47 5.8 0.02 chr10:122132385 A/C LIHC rs12416172 4.7e-05 367 19.58 21.47 5.8 0.02 chr10:122132545 G/A LIHC rs16910137 1.45e-07 368 19.8 20.57 4.3 0 chr10:130148659 A/C LIHC rs4948681 0.000107 364 20.45 19.87 13.67 0.05 chr10:42399592 A/G LIHC rs4408261 1.79e-05 365 20.45 20.03 13.6 0.01 chr10:42407999 A/G LIHC rs12765826 7.76e-05 364 20.23 20.27 13.67 0.04 chr10:42422803 G/T LIHC rs2154316 6.36e-05 360 20.4 20.15 13.67 0.03 chr10:42444018 G/A LIHC rs11239673 5.99e-06 354 20.17 19.7 8.25 0 chr10:42553617 C/T LIHC rs2473114 2.98e-06 368 8.25 19.37 20.27 0 chr10:42687777 C/T LIHC rs17159090 1.66e-05 368 2.63 19.93 19.8 0.01 chr10:45712353 A/G LIHC rs490407 2.69e-07 367 5.7 16.58 20.17 0 chr1:108106264 G/A LIHC rs488605 2.69e-07 367 5.7 16.58 20.17 0 chr1:108106441 T/G LIHC rs575999 2.69e-07 367 5.7 16.58 20.17 0 chr1:108106667 C/T LIHC rs629660 9.41e-07 366 9.07 18.23 20.17 0 chr1:108114647 C/T LIHC rs631059 9.41e-07 366 9.07 18.23 20.17 0 chr1:108115004 A/G LIHC rs631426 9.41e-07 366 9.07 18.23 20.17 0 chr1:108115056 C/A LIHC rs632316 9.41e-07 366 9.07 18.23 20.17 0 chr1:108115275 G/A LIHC rs4571991 9.41e-07 365 9.07 18.23 20.27 0 chr1:108115287 T/A LIHC rs1660427 9.41e-07 366 9.07 18.23 20.17 0 chr1:108115367 A/G LIHC rs1660426 9.41e-07 366 9.07 18.23 20.17 0 chr1:108115382 T/C LIHC rs1660425 9.41e-07 366 9.07 18.23 20.17 0 chr1:108115570 A/G LIHC rs1777442 9.41e-07 366 9.07 18.23 20.17 0 chr1:108116009 T/C LIHC rs1777443 8.26e-07 365 9.07 17.77 20.17 0 chr1:108116070 G/A LIHC rs1777444 8.26e-07 365 9.07 17.77 20.17 0 chr1:108116087 C/T LIHC rs1777446 9.79e-07 365 9.07 18.23 20.07 0 chr1:108116489 G/A LIHC rs5776928 9.79e-07 365 9.07 18.23 20.07 0 chr1:108116514 AT/A LIHC rs1660423 9.79e-07 365 9.07 18.23 20.07 0 chr1:108116572 T/C LIHC rs1613180 1.02e-06 364 9.07 18.23 20.17 0 chr1:108116931 T/C LIHC rs4915101 9.79e-07 365 9.07 18.23 20.07 0 chr1:108117032 G/T LIHC rs4915102 9.79e-07 365 9.07 18.23 20.07 0 chr1:108117106 G/A LIHC rs4915103 9.79e-07 365 9.07 18.23 20.07 0 chr1:108117117 T/G LIHC rs1777447 9.79e-07 365 9.07 18.23 20.07 0 chr1:108117292 T/C LIHC rs1660422 9.79e-07 365 9.07 18.23 20.07 0 chr1:108117329 T/A LIHC rs500254 2.18e-08 368 19.33 23.27 2.17 0 chr11:118808071 A/G LIHC rs523148 7.1e-09 363 2.17 23.1 19.23 0 chr11:118811753 T/C LIHC rs515707 1.98e-08 361 2.17 23.1 19.15 0 chr11:118814772 T/C LIHC rs587816 1.86e-08 360 2.17 22.93 19.15 0 chr11:118819162 A/C LIHC rs577121 1.86e-08 360 2.17 22.93 19.15 0 chr11:118819841 C/T LIHC rs373682957 1.64e-08 359 2.17 23.1 19.15 0 chr11:118820033 GTA/G LIHC rs583905 1.75e-08 358 2.17 23.27 19.15 0 chr11:118825199 G/A LIHC rs584935 1.75e-08 358 2.17 23.27 19.15 0 chr11:118825466 A/G LIHC rs10128600 1.6e-08 361 2.17 22.93 19.37 0 chr11:118829716 C/T LIHC rs17433496 0.000118 368 11.63 22.93 19.33 0.05 chr11:34921029 A/G LIHC rs3852515 4.65e-05 368 11.27 21.32 19.47 0.02 chr11:34942535 A/G LIHC rs61831488 6.3e-05 360 20.05 13.5 21.7 0.03 chr1:245421629 G/A LIHC rs12809790 8.71e-09 352 19.58 19.33 2.57 0 chr12:51125997 G/A LIHC rs7984010 4.17e-05 368 19.87 20.38 7.77 0.02 chr13:109758426 A/T LIHC rs9580956 2.27e-05 365 18.77 24.58 8.23 0.01 chr13:24364985 G/C LIHC rs9580959 2.27e-05 365 18.77 24.58 8.23 0.01 chr13:24365504 C/T LIHC rs9580960 2.27e-05 365 18.77 24.58 8.23 0.01 chr13:24365588 C/A LIHC rs876602 2.53e-05 368 12.43 23.02 18.17 0.01 chr13:51049971 A/G LIHC rs9584921 2.24e-05 368 9.97 18.8 19.87 0.01 chr13:98731518 C/G LIHC rs8033050 4.43e-05 360 14.33 22 19.13 0.02 chr15:82269648 G/A LIHC rs2252024 1.54e-05 368 2.6 21.3 19.5 0.01 chr15:96270018 A/G LIHC rs11860968 3.55e-07 367 19.33 22.33 1.87 0 chr16:1446612 T/C LIHC rs28666958 1.18e-07 362 19.53 21.07 1.87 0 chr16:1447124 A/G LIHC rs35462840 3.57e-07 367 19.37 22 1.87 0 chr16:1448269 A/G LIHC rs35308339 3.55e-07 367 19.33 22.33 1.87 0 chr16:1448509 T/C LIHC rs17135338 3.28e-07 368 19.43 22 1.87 0 chr16:1448571 A/G LIHC rs742409 3.78e-07 366 19.17 22.95 1.87 0 chr16:1449616 T/C LIHC rs742410 1.81e-07 363 19.37 22.67 1.87 0 chr16:1449703 T/C LIHC rs8047904 1e-04 352 19.13 22.33 1.03 0.04 chr16:1467851 C/G LIHC rs1996531 2.25e-05 368 11.47 18.53 20.95 0.01 chr16:80235576 G/T LIHC rs296360 8.38e-05 358 20.15 18.5 13.17 0.04 chr19:47885401 T/C LIHC rs212099 9.45e-05 357 20.15 18.5 12.57 0.04 chr19:47885745 T/A LIHC rs56285909 9.56e-05 360 19.73 20.07 4.67 0.04 chr2:127551271 T/C LIHC rs10205221 0.000116 361 29.3 18.8 18.77 0.05 chr2:20474483 A/C LIHC rs959058 3.84e-06 368 29.3 17.62 18.87 0 chr2:20475840 A/G LIHC rs12160320 3.6e-06 353 21.28 15.67 9.43 0 chr22:37667890 G/A LIHC rs113978793 3.6e-06 353 21.28 15.67 9.43 0 chr22:37668534 G/A LIHC rs142107152 3.6e-06 353 21.28 15.67 9.43 0 chr22:37669586 GTCC/G LIHC rs35182980 6.78e-06 351 13.65 20.27 19.83 0 chr2:38717363 G/A LIHC rs17494049 4.98e-06 352 13.65 20.15 19.83 0 chr2:38717377 T/C LIHC rs12712614 3.76e-07 351 13.65 20.15 19.87 0 chr2:38721807 C/T LIHC rs4670891 2.04e-05 350 16.55 19.83 21.02 0.01 chr2:38736069 C/T LIHC rs4630748 5.56e-06 368 20.85 18.87 13.67 0 chr2:38763318 C/G LIHC rs4602206 2.98e-05 360 13.67 20.38 20.27 0.02 chr2:38768822 G/C LIHC rs3112200 7.48e-05 368 19.8 20.27 13.65 0.04 chr2:38775495 G/T LIHC rs12477252 1.4e-05 364 13.58 20.27 20.27 0.01 chr2:38777716 G/A LIHC rs10173118 1.4e-05 364 13.58 20.27 20.27 0.01 chr2:38778063 T/C LIHC rs6753251 9.65e-05 365 19.87 20.15 13.65 0.04 chr2:38779972 C/T LIHC rs34391966 1.55e-05 365 13.58 20.27 20.48 0.01 chr2:38780977 CCTT/C LIHC rs62144837 6.95e-05 366 13.53 20.03 20.48 0.03 chr2:38782745 C/T LIHC rs13014136 1.92e-05 366 13.53 20.27 20.48 0.01 chr2:38783162 G/T LIHC rs11694383 9.55e-05 364 19.97 20.27 13.63 0.04 chr2:38785714 A/G LIHC rs56393601 8.03e-05 364 13.58 20.5 20.27 0.04 chr2:38786964 T/C LIHC rs13417196 1.95e-05 359 13.53 20.5 20.27 0.01 chr2:38787579 A/G LIHC rs13411868 3.47e-05 359 13.53 20.7 20.48 0.02 chr2:38788959 T/G LIHC rs12473036 2.72e-05 358 13.58 20.7 20.48 0.02 chr2:38789778 T/C LIHC rs12469681 4.1e-05 358 13.53 20.7 20.27 0.02 chr2:38790021 G/C LIHC rs13029406 0.000102 368 13.63 21.1 19.97 0.04 chr2:38802932 C/T LIHC rs3770681 1e-05 368 20.27 20.03 13.73 0.01 chr2:38822999 G/T LIHC rs7589162 0.000103 364 13.58 20.9 19.87 0.04 chr2:38826403 G/C LIHC rs151253056 0.000112 356 13.63 20.15 19.87 0.05 chr2:38827133 A/AAAAAT LIHC rs3112149 6.27e-05 361 19.8 20.5 13.53 0.03 chr2:38827976 C/A LIHC rs3099984 6.27e-05 361 19.8 20.5 13.53 0.03 chr2:38828120 A/T LIHC rs60012208 6.41e-05 361 19.83 20.38 13.53 0.03 chr2:38828664 G/A LIHC rs3099985 6.27e-05 361 19.8 20.5 13.53 0.03 chr2:38829448 G/T LIHC rs3099987 6.02e-05 360 19.8 20.7 13.53 0.03 chr2:38830905 G/A LIHC rs3099988 0.000102 359 19.87 20.38 13.35 0.04 chr2:38831415 T/C LIHC rs7602287 7.79e-05 357 19.83 20.38 13.53 0.04 chr2:38831805 T/C LIHC rs7588621 7.61e-05 357 19.8 20.5 13.53 0.04 chr2:38831886 G/A LIHC rs3099989 7.61e-05 357 19.8 20.5 13.53 0.04 chr2:38832028 G/A LIHC rs7591959 9.86e-05 357 13.63 20.5 20.27 0.04 chr2:38832653 C/T LIHC rs3099991 4.41e-05 353 20.48 20.5 13.35 0.02 chr2:38833037 G/A LIHC rs6732083 4.32e-05 362 13.83 19.45 21.2 0.02 chr2:38854592 G/C LIHC rs7598922 3.27e-05 362 13.83 20.03 21.03 0.02 chr2:38855202 T/C LIHC rs12373604 3.22e-05 364 13.75 20.03 21.12 0.02 chr2:38857465 C/G LIHC rs10573961 7.69e-05 362 13.75 20.03 21.12 0.04 chr2:38858433 CTG/C LIHC rs6738403 7.68e-05 367 16.67 19.45 20.85 0.04 chr2:38866003 G/A LIHC rs35282401 7.68e-05 367 16.67 19.45 20.85 0.04 chr2:38866084 AG/A LIHC rs35920872 4.6e-05 363 13.83 18.87 21 0.02 chr2:38868806 TTTTA/T LIHC rs6741088 8.13e-05 364 13.83 18.87 20.85 0.04 chr2:38868867 T/A LIHC rs1901289 5.32e-05 361 16.67 18.87 21 0.03 chr2:38895485 C/T LIHC rs1049678 8.87e-05 368 9.27 21.85 19.87 0.04 chr2:75655530 A/G LIHC rs6749244 3.47e-05 365 19.5 21.82 7.18 0.02 chr2:75697787 T/G LIHC rs55819321 5.12e-05 360 19.33 20.07 18.4 0.03 chr3:151764164 A/G LIHC rs73164701 3.29e-05 359 19.33 20.17 18.4 0.02 chr3:151765359 T/C LIHC rs56080392 3.04e-05 360 19.33 20.07 18.4 0.02 chr3:151767828 C/T LIHC rs67592173 3.38e-05 366 19.3 20.17 18.4 0.02 chr3:151772509 C/T LIHC rs368086494 4.65e-05 365 19.3 20.27 17.87 0.02 chr3:151777233 GTT/GTTTTT LIHC rs73166926 3.38e-05 366 19.3 20.17 18.4 0.02 chr3:151777451 G/A LIHC rs56213430 2.94e-05 353 18.52 20.5 18.85 0.02 chr3:151799215 C/A LIHC rs8193029 2.18e-05 358 18.5 21.13 19.3 0.01 chr3:151825439 T/C LIHC rs6551180 2.36e-06 368 19.5 24 1.73 0 chr3:27204499 C/T LIHC rs9844682 2.36e-06 368 19.5 24 1.73 0 chr3:27206837 C/T LIHC rs6788649 3.26e-05 359 20.9 16 3.23 0.02 chr3:34777568 C/G LIHC rs2221843 1.2e-05 368 9.3 19.97 20.03 0.01 chr4:186223046 C/G LIHC rs4109037 2.51e-05 361 19.23 21.1 20.67 0.01 chr4:56909443 T/A LIHC rs11573128 1.81e-05 368 19.43 20.23 22.02 0.01 chr4:57032064 G/T LIHC rs4464622 0.000106 357 21.08 19.3 19.62 0.05 chr4:69253003 A/T LIHC rs4694202 0.000106 368 21.2 18.52 20.03 0.05 chr4:69254604 C/T LIHC rs13123377 5.19e-05 362 20.9 19.08 19.37 0.03 chr4:69254939 C/T LIHC rs9999576 5.73e-05 362 20.9 19.08 19.37 0.03 chr4:69255559 G/C LIHC rs13136396 5.87e-05 357 20.9 19.17 19.37 0.03 chr4:69257272 G/A LIHC rs113681861 1.25e-05 363 20.03 16.2 11.42 0.01 chr5:150505607 G/C LIHC rs10461615 4.18e-06 354 19.43 21.33 9.3 0 chr5:56715913 A/G LIHC rs12653625 2.68e-08 365 20.03 18.4 6.8 0 chr5:56738007 G/A LIHC rs5868027 2.68e-08 365 20.03 18.4 6.8 0 chr5:56743302 CA/C LIHC rs201435918 3.45e-05 353 17.33 21.15 19.6 0.02 chr5:75333339 CAT/C LIHC rs17244813 0.000108 366 17.83 21.1 19.6 0.05 chr5:75345266 CT/C LIHC rs41379244 2.29e-05 368 9.62 24.43 18.83 0.01 chr8:32791658 A/G LIHC rs11785163 4.59e-05 368 20.07 19.87 11.77 0.02 chr8:89857181 G/T LIHC rs10975728 2.47e-08 368 4.67 15.97 20.27 0 chr9:6670448 C/T LIHC rs10815462 2.71e-08 366 20.27 15.97 4.67 0 chr9:6671045 G/A LIHC rs10117715 2.72e-08 365 20.27 16 4.67 0 chr9:6671230 A/G LIHC rs10114673 2.71e-08 366 20.27 15.97 4.67 0 chr9:6671376 C/T LIHC rs10118480 2.73e-08 365 20.27 16 4.67 0 chr9:6671492 T/G LIHC rs10120666 2.73e-08 365 20.27 16 4.67 0 chr9:6671632 G/A LIHC rs10975729 3.01e-08 364 20.17 16 4.67 0 chr9:6671791 T/C LIHC rs10975730 2.73e-08 365 20.27 16 4.67 0 chr9:6671850 T/C LIHC rs34028852 2.73e-08 365 20.27 16 4.67 0 chr9:6671892 G/T LIHC rs12552255 1.03e-05 368 19.6 20.7 12 0.01 chr9:95674876 A/G LIHC rs16920357 3.73e-05 368 19.7 18.95 NA 0.02 chr9:4007769 A/C