cancer_type SNP_id log_rank_pvalue sample_size Median_survival_time_AA Median_survival_time_Aa Median_survival_time_aa FDR SNP_position Alleles HNSC rs11189936 2.29e-05 515 22.33 16.13 6.37 0.02 chr10:99020772 G/T HNSC rs12295437 3e-07 515 5.7 20 22.2 0 chr11:12972792 C/T HNSC rs662799 5.68e-10 506 6.15 18.2 22.9 0 chr11:116792991 G/A HNSC rs10047462 3.19e-06 503 7.32 19.3 21.95 0.01 chr11:116851325 G/T HNSC rs12739135 1.89e-06 501 21.37 23.63 8.95 0 chr1:151236369 G/C HNSC rs16833107 1.84e-06 501 21.37 23.63 8.95 0 chr1:151260531 C/T HNSC rs35485741 2.2e-06 502 21.33 22.85 8.95 0 chr1:151269433 G/C HNSC rs59912932 1.35e-06 504 21.23 23.9 8.95 0 chr1:151281547 A/C HNSC rs429721 6.59e-05 511 22.07 19.23 10.43 0.04 chr1:153110955 G/C HNSC rs441873 3.38e-06 514 22.9 18.28 14.13 0.01 chr1:153119307 A/G HNSC rs310132 3.38e-06 514 22.9 18.28 14.13 0.01 chr1:153122891 C/T HNSC rs381115 2.66e-05 515 22.87 18.82 14.13 0.03 chr1:153126869 C/T HNSC rs382804 5.65e-06 513 22.87 18.75 14.13 0.01 chr1:153129985 T/C HNSC rs432018 5.65e-06 513 22.87 18.75 14.13 0.01 chr1:153130155 A/G HNSC rs485374 5.32e-05 515 19.07 17.67 22.83 0.04 chr1:153133389 C/G HNSC rs12057871 3.82e-08 506 23.8 17.33 13.38 0 chr1:153136916 A/C HNSC rs492296 3.74e-06 511 22.87 18.28 14.13 0.01 chr1:153136919 A/C HNSC rs495757 3.74e-06 511 22.87 18.28 14.13 0.01 chr1:153137154 T/C HNSC rs564211 1.58e-06 511 23.1 18.07 14.13 0 chr1:153141601 G/T HNSC rs530590 1.19e-06 515 13.38 20.1 22.9 0 chr1:153179146 G/T HNSC rs12409982 5.2e-05 513 22.2 22.73 13.53 0.04 chr1:168553146 A/G HNSC rs12568619 5.2e-05 513 22.2 22.73 13.53 0.04 chr1:168553496 A/G HNSC rs12021763 1.24e-05 515 22.22 22.73 13.48 0.02 chr1:168558845 G/T HNSC rs1123864 9.71e-06 515 22.33 22.08 13.48 0.01 chr1:168559223 A/G HNSC rs6427837 1.17e-05 515 10.5 22.08 21.8 0.01 chr1:200671753 G/T HNSC rs78894972 2.61e-05 513 22.37 18.93 6.25 0.03 chr1:212759937 C/T HNSC rs1007036 1.46e-06 515 22.37 18.45 6.47 0 chr1:212778022 A/G HNSC rs186596167 1.43e-05 512 22.5 18.45 6.03 0.02 chr1:212779360 C/T HNSC rs115951155 1.48e-05 511 22.57 18.45 6.03 0.02 chr1:212811108 G/A HNSC rs115314537 3.18e-05 513 22.23 19.13 6.25 0.03 chr1:212821763 T/C HNSC rs139576627 3.18e-05 513 22.23 19.13 6.25 0.03 chr1:212822794 CCTG/C HNSC rs11046043 1.5e-06 515 9.13 18.25 22.65 0 chr12:21435234 C/T HNSC rs61942827 2.16e-05 504 20.75 25.22 11.95 0.02 chr12:48439998 G/A HNSC rs61940822 2.49e-05 512 20.75 26.63 12.9 0.02 chr12:48513088 G/A HNSC rs80009676 1.78e-05 512 20.75 26.63 14.13 0.02 chr12:48515717 T/C HNSC rs61940824 1.83e-05 513 20.75 26.63 13.52 0.02 chr12:48515975 G/A HNSC rs61940826 1.83e-05 513 20.75 26.63 13.52 0.02 chr12:48517499 A/C HNSC rs55739289 1.83e-05 513 20.75 26.63 13.52 0.02 chr12:48518018 G/A HNSC rs56090553 1.95e-05 512 20.73 26.63 13.52 0.02 chr12:48520632 G/A HNSC rs55983865 1.83e-05 513 20.75 26.63 13.52 0.02 chr12:48520972 C/T HNSC rs74786960 1.86e-05 514 20.77 26.63 13.52 0.02 chr12:48522739 T/C HNSC rs2587768 6.18e-08 509 8.33 18.2 22.15 0 chr15:100483874 A/G HNSC rs798121 5.62e-08 515 23 19.9 9.43 0 chr15:30823352 A/G HNSC rs798122 3.97e-06 513 22.87 20 10.6 0.01 chr15:30823375 T/C HNSC rs798123 3.97e-06 513 22.87 20 10.6 0.01 chr15:30823650 G/T HNSC rs798124 3.97e-06 513 22.87 20 10.6 0.01 chr15:30824339 C/T HNSC rs798126 3.97e-06 513 22.87 20 10.6 0.01 chr15:30825007 G/A HNSC rs798128 3.97e-06 513 22.87 20 10.6 0.01 chr15:30826004 C/T HNSC rs798083 3.23e-06 513 22.9 19.9 10.6 0.01 chr15:30833145 T/C HNSC rs798085 3.06e-06 514 22.87 19.9 10.6 0.01 chr15:30835637 G/A HNSC rs2691682 1.05e-05 512 22.83 20.03 12.07 0.01 chr15:30842390 A/C HNSC rs2955782 1.05e-05 512 22.83 20.03 12.07 0.01 chr15:30843388 G/A HNSC rs811304 1.34e-05 515 22.83 20.02 12.07 0.02 chr15:30843586 C/T HNSC rs147693035 1.01e-05 510 22.83 20 12.07 0.01 chr15:30846296 TATGAA/T HNSC rs143102238 1.11e-05 504 22.83 20.53 12.07 0.01 chr15:30847318 AGAAAT/A HNSC rs1088475 1.04e-05 511 22.83 20.02 12.07 0.01 chr15:30848497 C/T HNSC rs8036676 9.69e-06 507 12.07 20.53 22.78 0.01 chr15:30861155 T/C HNSC rs9806159 3e-05 515 22.78 20.83 13.23 0.03 chr15:30917451 G/T HNSC rs7178533 1.51e-05 509 22.7 21.37 13.68 0.02 chr15:30923773 C/G HNSC rs34178381 4.67e-07 512 22.28 20.83 9.43 0 chr15:30930382 G/C HNSC rs71420529 4.26e-07 511 22.22 20.68 9.43 0 chr15:30933735 GATTATA/G HNSC rs8035729 1.73e-05 515 9.03 15.15 22.9 0.02 chr15:35110332 C/T HNSC rs16970734 8.1e-15 515 4.62 21.5 21.78 0 chr15:40478898 C/T HNSC rs623187 3.26e-08 511 22.2 21.8 5.37 0 chr15:40480988 C/G HNSC rs74244686 1.93e-12 506 21.93 21.8 4.2 0 chr15:40494457 C/T HNSC rs7168927 2.42e-08 512 5.37 21.17 22.07 0 chr15:40505168 T/C HNSC rs75814867 1.11e-15 513 21.78 22.1 4.62 0 chr15:40511383 G/T HNSC rs4924476 3.6e-08 514 5.37 21.5 21.93 0 chr15:40519388 C/T HNSC rs74749768 1.11e-15 513 21.78 22.1 4.62 0 chr15:40528028 G/C HNSC rs7164166 3.78e-08 512 5.37 21.17 22.07 0 chr15:40528606 A/G HNSC rs2034653 4.27e-08 511 5.37 20.83 22.07 0 chr15:40531883 T/A HNSC rs8029208 3.78e-08 512 5.37 21.17 22.07 0 chr15:40532511 T/C HNSC rs2959535 4.1e-08 512 5.37 20.83 22.2 0 chr15:40533896 T/G HNSC rs6492952 5.78e-08 515 5.37 21.17 21.93 0 chr15:40542900 A/G HNSC rs113156784 8.04e-07 500 22.22 23.17 5.33 0 chr16:74298154 T/C HNSC rs3935513 2.15e-06 515 22.33 20.82 5.93 0 chr16:77742856 C/T HNSC rs79795911 2.76e-06 505 22.57 20.83 5.93 0 chr16:77745693 C/T HNSC rs142001415 3.19e-06 503 22.63 20.13 5.93 0.01 chr16:77748065 CT/C HNSC rs75163144 2.99e-06 506 22.67 20.8 5.93 0.01 chr16:77748336 G/T HNSC rs2978631 1.2e-05 515 9.2 21.17 22.2 0.02 chr16:78525910 G/T HNSC rs3106330 8.68e-06 513 9.2 21.32 22.22 0.01 chr16:78526048 G/A HNSC rs3115959 8.68e-06 513 9.2 21.32 22.22 0.01 chr16:78526055 T/C HNSC rs3106331 8.78e-06 515 22.15 21.32 9.2 0.01 chr16:78526097 C/T HNSC rs2738491 3.26e-06 511 10.9 20.53 22.23 0.01 chr16:78532553 G/A HNSC rs2667623 3.37e-06 511 10.9 20.53 22.2 0.01 chr16:78533606 C/G HNSC rs3114908 1.98e-05 515 17.33 24.23 21.3 0.02 chr16:89317317 A/G HNSC rs17806489 4.56e-05 515 21.8 21.3 9.73 0.04 chr17:18346297 C/T HNSC rs139455718 7.79e-06 510 21.93 20.53 9.78 0.01 chr17:18374106 AAGG/A HNSC rs112347175 1.15e-05 507 21.93 20.32 10.17 0.01 chr17:18378059 G/A HNSC rs16966118 5.83e-06 515 9.43 15.87 22.87 0.01 chr18:34873725 A/G HNSC rs140192488 2.18e-14 515 21.87 20.77 0.77 0 chr1:94901123 G/A HNSC rs2168644 4.27e-05 504 18.73 23.98 28.45 0.03 chr19:58277027 T/C HNSC rs11666156 2.79e-05 509 19.1 23.98 28.45 0.03 chr19:58278993 C/A HNSC rs12986027 4.16e-05 511 18.93 23.8 28.08 0.03 chr19:58282230 A/G HNSC rs35390011 2.53e-05 510 18.93 23.85 28.08 0.03 chr19:58283896 AG/A HNSC rs8105044 9.81e-06 515 28.45 23.8 18.93 0.01 chr19:58285439 C/G HNSC rs11669373 1.71e-05 512 18.93 23.9 28.4 0.02 chr19:58287319 G/T HNSC rs11671477 1.15e-05 515 31.67 23.67 18.93 0.01 chr19:58288980 C/T HNSC rs199943319 7.47e-07 514 21.33 25.07 5.97 0 chr20:35283297 AAT/A HNSC rs2425046 1.72e-08 515 21.37 25 7.23 0 chr20:35283858 A/G HNSC rs2425048 7.67e-07 514 21.37 25 5.97 0 chr20:35284920 C/T HNSC rs146847321 3.04e-08 515 22.5 20.15 7 0 chr2:99397487 C/CCA HNSC rs9308819 3.04e-08 515 22.5 20.15 7 0 chr2:99400386 G/A HNSC rs139499925 3.04e-08 515 22.5 20.15 7 0 chr2:99407396 C/CA HNSC rs28382947 3.14e-08 514 22.58 20.15 7 0 chr2:99412013 C/T HNSC rs3838582 3.04e-08 515 22.5 20.15 7 0 chr2:99414650 CTT/C HNSC rs13426758 3.04e-08 515 22.5 20.15 7 0 chr2:99423494 C/T HNSC rs13429185 2.94e-06 511 22.27 20.15 7.17 0.01 chr2:99429321 C/T HNSC rs13429806 3.57e-06 514 22.42 20.1 7.17 0.01 chr2:99454028 C/A HNSC rs9308821 3.33e-06 513 22.42 19.72 7.17 0.01 chr2:99457050 G/C HNSC rs10180138 2.59e-06 512 22.42 20.1 7.17 0 chr2:99458134 G/C HNSC rs28369949 3.04e-06 514 22.42 20.1 7.17 0.01 chr2:99462298 C/T HNSC rs13415713 3.04e-06 514 22.42 20.1 7.17 0.01 chr2:99465683 A/T HNSC rs9308822 1.63e-06 507 21.93 20.77 7.17 0 chr2:99469342 T/C HNSC rs13405400 3.04e-06 514 22.42 20.1 7.17 0.01 chr2:99471870 C/G HNSC rs13420087 2.17e-06 514 22.33 20.15 7.17 0 chr2:99476174 C/A HNSC rs10176205 1.79e-06 514 22.27 20.2 7.17 0 chr2:99484184 T/C HNSC rs10173883 1.79e-06 514 22.27 20.2 7.17 0 chr2:99484386 A/C HNSC rs1059524 1.11e-05 515 14.13 21.37 23.37 0.01 chr2:131423910 A/C HNSC rs9627359 4.28e-06 510 21.65 23.67 11.7 0.01 chr22:46268534 C/G HNSC rs9627360 4.64e-06 512 21.65 23.67 11.7 0.01 chr22:46268741 G/A HNSC rs12168162 5.41e-07 514 21.78 23.42 10.77 0 chr22:46268958 A/G HNSC rs9627363 2.28e-05 514 21.78 23.1 11.7 0.02 chr22:46270264 T/C HNSC rs67637399 5.25e-05 511 21.77 21.93 11.7 0.04 chr22:46271022 T/TA HNSC rs73177058 2.28e-05 514 21.78 23.1 11.7 0.02 chr22:46272182 G/T HNSC rs6008443 1.5e-05 513 21.78 23.13 11.7 0.02 chr22:46272795 C/T HNSC rs10561665 5.08e-06 514 22.1 20 6.3 0.01 chr2:75024862 GACA/G HNSC rs116306855 2.31e-06 507 21.37 27.43 5.03 0 chr2:85583547 G/A HNSC rs2091798 4.47e-08 514 6.83 19.23 22.42 0 chr2:99207468 T/C HNSC rs13032885 1.16e-10 514 6.83 20.78 22.2 0 chr2:99259281 G/A HNSC rs2309616 9.26e-07 513 7 20.48 22.2 0 chr2:99263499 A/C HNSC rs1922627 9.26e-07 513 7 20.48 22.2 0 chr2:99263536 G/T HNSC rs7567462 9.26e-07 513 7 20.48 22.2 0 chr2:99264765 T/C HNSC rs1948101 9.26e-07 513 7 20.48 22.2 0 chr2:99266672 G/C HNSC rs11123776 9.26e-07 513 7 20.48 22.2 0 chr2:99268014 C/T HNSC rs7599843 8.59e-07 514 7 20.48 22.27 0 chr2:99269385 C/G HNSC rs11123778 9.2e-07 513 7 20.77 22.27 0 chr2:99270758 T/C HNSC rs4851197 1.18e-06 512 7 20.48 22.27 0 chr2:99276415 A/G HNSC rs6744199 1.51e-08 513 7 20.8 22.07 0 chr2:99277312 T/C HNSC rs10590785 1.37e-10 513 6.83 20.78 22.27 0 chr2:99279778 GTT/G HNSC rs7581337 9.2e-07 513 7 20.77 22.27 0 chr2:99279908 A/G HNSC rs7584705 9.2e-07 513 7 20.77 22.27 0 chr2:99280515 A/C HNSC rs2309615 9.29e-07 512 7 20.77 22.2 0 chr2:99282535 T/C HNSC rs7595318 9.2e-07 513 7 20.77 22.27 0 chr2:99282850 T/G HNSC rs7606279 6.03e-07 512 7 20.78 22.27 0 chr2:99285603 T/C HNSC rs7567230 9.2e-07 513 7 20.77 22.27 0 chr2:99287490 G/A HNSC rs7603388 9.2e-07 513 7 20.77 22.27 0 chr2:99287873 G/T HNSC rs6749029 9.2e-07 513 7 20.77 22.27 0 chr2:99288527 T/C HNSC rs4522654 9.2e-07 513 7 20.77 22.27 0 chr2:99293663 G/A HNSC rs4851198 9.2e-07 513 7 20.77 22.27 0 chr2:99294509 G/T HNSC rs4851199 9.2e-07 513 7 20.77 22.27 0 chr2:99294647 A/G HNSC rs1922625 2.12e-06 515 22.27 20.48 7.17 0 chr2:99297535 A/C HNSC rs74177686 3.17e-06 508 7.17 20.48 22.5 0.01 chr2:99301614 A/G HNSC rs7579171 3.74e-06 510 7.17 20.48 22.5 0.01 chr2:99304399 A/C HNSC rs6745645 3.74e-06 510 7.17 20.48 22.5 0.01 chr2:99305023 G/A HNSC rs12992141 4e-06 504 7.17 20.48 22.2 0.01 chr2:99305938 A/G HNSC rs1450459 3.19e-05 504 10.9 23.5 22.73 0.03 chr4:120925312 A/G HNSC rs2770966 1.37e-05 515 9.08 19.22 22.63 0.02 chr5:181252117 A/G HNSC rs16893429 3.5e-06 515 21.87 20.73 7.78 0.01 chr5:24491022 C/T HNSC rs12514119 1.41e-05 513 22.1 18.77 9.13 0.02 chr5:30802327 T/C HNSC rs12521718 1.41e-05 513 22.1 18.77 9.13 0.02 chr5:30802411 G/A HNSC rs79114176 1.41e-05 513 22.1 18.77 9.13 0.02 chr5:30803187 A/G HNSC rs2133762 1.41e-05 513 22.1 18.77 9.13 0.02 chr5:30804933 G/C HNSC rs78744081 1.48e-05 514 22.1 19.23 9.13 0.02 chr5:30805758 G/C HNSC rs144317345 1.48e-05 514 22.1 19.23 9.13 0.02 chr5:30806580 G/GA HNSC rs141574594 1.4e-05 515 22.15 19.23 9.13 0.02 chr5:30807910 G/GT HNSC rs146998994 6.45e-07 505 22.78 18.48 8.1 0 chr6:4102616 CTTTG/C HNSC rs2853992 2.61e-05 506 22.83 19.27 9.32 0.03 chr6:31410524 G/A HNSC rs1131897 2.61e-05 506 22.83 19.27 9.32 0.03 chr6:31411357 C/G HNSC rs9295989 2.86e-05 507 22.83 19.25 9.32 0.03 chr6:31418223 G/C HNSC rs9295990 2.86e-05 507 22.83 19.25 9.32 0.03 chr6:31418242 T/G HNSC rs3880459 2.86e-05 507 22.83 19.25 9.32 0.03 chr6:31420135 T/G HNSC rs2516447 2.86e-05 507 22.83 19.25 9.32 0.03 chr6:31422844 T/C HNSC rs12212090 1.88e-05 508 14.03 22.7 24.23 0.02 chr6:37464032 A/G HNSC rs62406516 1.17e-05 503 13.97 23.1 25.25 0.01 chr6:37471588 C/T HNSC rs10947673 9.08e-06 504 14.08 22.9 24.73 0.01 chr6:37477303 C/T HNSC rs904251 1.59e-05 505 14.08 23 24.23 0.02 chr6:37483920 G/T HNSC rs1317563 1.37e-06 506 13.9 23 26.53 0 chr6:37484078 G/T HNSC rs9446931 7.16e-05 492 21.1 24.12 13.98 0.05 chr6:73576536 C/T HNSC rs9446932 7.16e-05 492 21.1 24.12 13.98 0.05 chr6:73576537 A/G HNSC rs6910702 7.16e-05 493 21.03 24.12 13.98 0.05 chr6:73576624 G/A HNSC rs34485415 5.79e-05 498 20.73 24.62 13.43 0.04 chr6:73576994 G/A HNSC rs3843530 1.87e-05 515 9.27 21.07 22.82 0.02 chr7:65267493 A/G HNSC rs11993005 1.78e-06 515 6.37 18.1 22.67 0 chr8:17347440 A/C HNSC rs11994648 2.81e-05 515 22.28 17.35 4.3 0.03 chr8:8280641 G/T HNSC rs593533 1.13e-05 506 21.5 25.13 6.97 0.01 chr8:97439770 C/T HNSC rs3731232 2.27e-10 515 5.08 17.85 24.17 0 chr9:21978444 C/G